GeneSet NEGATIVE_REGULATION_OF_CELLULAR_BIOSYNTHETIC_PROCESS (GO_-_Biological_Process.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
NonAssociatedWithProgression -2.7 0.04604 13.0 8.0 3.53
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000166313 APBB1 o-o
ENSG00000069399 BCL3 NonAssociatedWithProgression
ENSG00000012048 BRCA1 NonAssociatedWithProgression
ENSG00000086232 EIF2AK1 NonAssociatedWithProgression
ENSG00000172071 EIF2AK3 NonAssociatedWithProgression
ENSG00000141543 EIF4A3 NonAssociatedWithProgression
ENSG00000140564 FURIN o++a
ENSG00000102393 GLA ---
ENSG00000186010 NDUFA13 o-o
ENSG00000120727 PAIP2 NonAssociatedWithProgression
ENSG00000185187 SIGIRR o--b
ENSG00000142168 SOD1 NonAssociatedWithProgression
ENSG00000165699 TSC1 NonAssociatedWithProgression