PEACHi
GeneSet TTAYRTAA_V$E4BP4_01 (TFmiRNA_Targets.gmt.txt) is enriched in the following clusters
Cluster log(P) Qvalue Observed in Background Observed in Cluster Expected in Cluster
+oo -3.8 0.03976 63.0 6.0 1.18
Gene expression pattern
Figure: Temporal expression patterns were grouped into clusters with differential expression profiles at three phases of the viral life cycle, namely reverse transcription, integration, and late phase. Boxplots on the left show the distribution of the normalized regression weights for each viral phase used in clustering. Expression change pattern of each gene over time is plotted for mock and HIV samples (dotted orange lines) along with the cluster median (bold red line).
List of genes
Ensembl ID Name Cluster
ENSG00000101126 ADNP NonAssociatedWithProgression
ENSG00000147853 AK3 o--b
ENSG00000182287 AP1S2 -+o
ENSG00000081181 ARG2 NonAssociatedWithProgression
ENSG00000049618 ARID1B o+o
ENSG00000143437 ARNT o++b
ENSG00000113369 ARRDC3 NonAssociatedWithProgression
ENSG00000111875 ASF1A NonAssociatedWithProgression
ENSG00000074370 ATP2A3 o--b
ENSG00000119866 BCL11A ---
ENSG00000113916 BCL6 +-o
ENSG00000134986 C5orf13 NonAssociatedWithProgression
ENSG00000196642 C9orf86 o--b
ENSG00000198668 CALM1 NonAssociatedWithProgression
ENSG00000132964 CDK8 o+o
ENSG00000109220 CHIC2 o++b
ENSG00000171603 CLSTN1 NonAssociatedWithProgression
ENSG00000204291 COL15A1 +oo
ENSG00000146592 CREB5 +oo
ENSG00000213923 CSNK1E o--b
ENSG00000175215 CTDSP2 o-+
ENSG00000172115 CYCS o--b
ENSG00000083799 CYLD o--b
ENSG00000108654 DDX5 NonAssociatedWithProgression
ENSG00000069345 DNAJA2 o-o
ENSG00000000419 DPM1 o+-
ENSG00000092964 DPYSL2 NonAssociatedWithProgression
ENSG00000144895 EIF2A o+-
ENSG00000100393 EP300 o++b
ENSG00000159023 EPB41 -o-
ENSG00000105722 ERF ---
ENSG00000244405 ETV5 +-o
ENSG00000110429 FBXO3 o+o
ENSG00000109670 FBXW7 o+-
ENSG00000181027 FKRP o+o
ENSG00000187239 FNBP1 o--b
ENSG00000034713 GABARAPL2 -+o
ENSG00000163041 H3F3A NonAssociatedWithProgression
ENSG00000051108 HERPUD1 +oo
ENSG00000127124 HIVEP3 +-o
ENSG00000106348 IMPDH1 o--a
ENSG00000153487 ING1 NonAssociatedWithProgression
ENSG00000040933 INPP4A NonAssociatedWithProgression
ENSG00000184216 IRAK1 o--a
ENSG00000170604 IRF2BP1 ---
ENSG00000171988 JMJD1C +oo
ENSG00000143013 LMO4 -+o
ENSG00000034152 MAP2K3 ---
ENSG00000139793 MBNL2 NonAssociatedWithProgression
ENSG00000169057 MECP2 o--a
ENSG00000099875 MKNK2 o--b
ENSG00000005483 MLL5 +oo
ENSG00000108852 MPP2 NonAssociatedWithProgression
ENSG00000072415 MPP5 NonAssociatedWithProgression
ENSG00000105926 MPP6 o--b
ENSG00000165030 NFIL3 -+o
ENSG00000136448 NMT1 o--b
ENSG00000152465 NMT2 NonAssociatedWithProgression
ENSG00000139946 PELI2 +oo
ENSG00000132326 PER2 +-o
ENSG00000102144 PGK1 NonAssociatedWithProgression
ENSG00000117461 PIK3R3 NonAssociatedWithProgression
ENSG00000143442 POGZ NonAssociatedWithProgression
ENSG00000131626 PPFIA1 NonAssociatedWithProgression
ENSG00000162409 PRKAA2 o++a
ENSG00000181929 PRKAG1 ---
ENSG00000171867 PRNP NonAssociatedWithProgression
ENSG00000185129 PURA ---
ENSG00000182732 RGS6 o++a
ENSG00000008853 RHOBTB2 NonAssociatedWithProgression
ENSG00000120742 SERP1 --o
ENSG00000080189 SLC35C2 ---
ENSG00000158480 SPATA2 NonAssociatedWithProgression
ENSG00000187678 SPRY4 +-o
ENSG00000125834 STK35 ---
ENSG00000116030 SUMO1 NonAssociatedWithProgression
ENSG00000114126 TFDP2 o--b
ENSG00000112561 TFEB ---
ENSG00000141232 TOB1 NonAssociatedWithProgression
ENSG00000213689 TREX1 o--b
ENSG00000186591 UBE2H NonAssociatedWithProgression
ENSG00000152818 UTRN -+o
ENSG00000166483 WEE1 NonAssociatedWithProgression
ENSG00000185728 YTHDF3 o--b
ENSG00000170027 YWHAG o+-
ENSG00000213588 ZBTB9 o--a
ENSG00000175048 ZDHHC14 ---
ENSG00000156599 ZDHHC5 o--b
ENSG00000198081 ZFP161 NonAssociatedWithProgression
ENSG00000157077 ZFYVE9 oo+
ENSG00000178764 ZHX2 NonAssociatedWithProgression
ENSG00000180938 ZNF572 +o+